Transcript: lnc-ADAM19-2:1

Basic information

LNCipedia transcript ID: lnc-ADAM19-2:1 
LNCipedia gene ID: lnc-ADAM19-2
Ensembl Gene ID: ENSG00000251405
Ensembl Transcript ID: ENST00000519499
Location (hg19): chr5:156789623-156887086
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 741 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519499.1; CTB-109A12.1-002; OTTHUMT00000373787.1; NONHSAT104762
Alternative gene names: ENSG00000251405.2; CTB-109A12.1; OTTHUMG00000163480.2; AC008676.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.7605 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM19-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FNDC9-1:1
4.0 lnc-ADAM19-2:1
4.1 lnc-ADAM19-2:1
5.0 lnc-ADAM19-2:1
5.1 lnc-FAM71B-3:6
5.2 lnc-ADAM19-2:1