Transcript: lnc-ADAM19-2:9

Basic information

LNCipedia transcript ID: lnc-ADAM19-2:9 
LNCipedia gene ID: lnc-ADAM19-2
Ensembl Gene ID: ENSG00000248544
Ensembl Transcript ID: ENST00000508443
Location (hg19): chr5:156802749-156811947
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1932 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000508443.1; CTB-47B11.3-001; OTTHUMT00000373709.1; NONHSAT104764
Alternative gene names: ENSG00000248544.2; CTB-47B11.3; OTTHUMG00000163483.2; AC008676.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.5713 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM19-2:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM19-1:2
4.0 lnc-ADAM19-1:2
4.1 lnc-ADAM19-1:2
5.0 lnc-ADAM19-1:2
5.1 lnc-FAM71B-3:8
5.2 lnc-ADAM19-2:9