Transcript: lnc-ADAM20-2:1

Basic information

LNCipedia transcript ID: lnc-ADAM20-2:1 
LNCipedia gene ID: lnc-ADAM20-2
Location (hg19): chr14:70935598-70950473
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3034 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000556964; ENST00000556964.1; ADAM20P1-001; OTTHUMT00000413009.1
Alternative gene names: ENSG00000259158; CTD-2540L5.4; ENSG00000259158.1; ADAM20P1; OTTHUMG00000171329.1; ENSG00000259158.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 876.7957 coding 
CPAT coding probability 99.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADAM20-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADAM20-1:1
3.1 lnc-ADAM20-2:1
4.0 lnc-ADAM20-2:1
4.1 lnc-ADAM20-2:1
5.0 lnc-ADAM20-2:1
5.1 lnc-ABCD4-57:1
5.2 lnc-ADAM20-2:1