Transcript: lnc-ADAM21-2:2

Basic information

LNCipedia transcript ID: lnc-ADAM21-2:2 
LNCipedia gene ID: lnc-ADAM21-2
Location (hg19): chr14:70833709-70838831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 678 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000555271; ENST00000555271.1; RP11-718G2.4-002; OTTHUMT00000413006.1; NONHSAT037561
Alternative gene names: ENSG00000258889; RP11-718G2.4; ENSG00000258889.1; OTTHUMG00000171326.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.6623 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM21-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADAM21-2:2
3.1 lnc-ADAM21-2:2
4.0 lnc-ADAM21-2:2
4.1 lnc-ADAM21-2:2
5.0 lnc-ADAM21-2:2
5.1 lnc-ACOT2-46:2
5.2 lnc-ADAM21-2:2