Transcript: lnc-ADAM8-2:1

Basic information

LNCipedia transcript ID: lnc-ADAM8-2:1 
LNCipedia gene ID: lnc-ADAM8-2
Ensembl Gene ID: ENSG00000235245
Ensembl Transcript ID: ENST00000424450
Location (hg19): chr10:135108691-135109481
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 626 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000424450.1; RP11-122K13.12-001; OTTHUMT00000106482.1; NONHSAT017141
Alternative gene names: ENSG00000235245.1; RP11-122K13.12; OTTHUMG00000046186.1; AL360181.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.2566 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM8-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM8-2:1
4.0 lnc-ADAM8-2:1
4.1 lnc-ADAM8-2:1
5.0 lnc-ADAM8-2:1
5.1 lnc-CALY-5:1
5.2 lnc-ADAM8-2:1