Transcript: lnc-ADAMTS15-5:11

Basic information

LNCipedia transcript ID: lnc-ADAMTS15-5:11 
LNCipedia gene ID: lnc-ADAMTS15-5
Location (hg19): chr11:130623501-130623933
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT025140; FPKM1_group_5601_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0869 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAMTS15-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf44-5:1
4.0 lnc-C11orf44-5:1
4.1 lnc-C11orf44-1:11
5.0 lnc-C11orf44-1:11
5.1 lnc-JAM3-26:11
5.2 lnc-ADAMTS15-5:11