Transcript: lnc-ADAR-6:1

Basic information

LNCipedia transcript ID: lnc-ADAR-6:1 
LNCipedia gene ID: lnc-ADAR-6
Location (hg19): chr1:154675205-154680702
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 532 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000515643.1; RP11-274N19.2-001; OTTHUMT00000099011.1; NONHSAT006640
Alternative gene names: ENSG00000250970.1; RP11-274N19.2; OTTHUMG00000041317.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -224.2661 non-coding 
CPAT coding probability 8.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAR-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNN3-1:1
4.0 lnc-KCNN3-1:1
4.1 lnc-KCNN3-1:1
5.0 lnc-KCNN3-1:1
5.1 lnc-UBE2Q1-7:1
5.2 lnc-ADAR-6:1