Transcript: lnc-ADGRB1-1:5

Basic information

LNCipedia transcript ID: lnc-ADGRB1-1:5 
LNCipedia gene ID: lnc-ADGRB1-1
Ensembl Gene ID: ENSG00000261693
Ensembl Transcript ID: ENST00000569285
Location (hg19): chr8:143485013-143488389
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3377 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569285.1; RP13-467H17.1-001; OTTHUMT00000380686.1; NONHSAT129452
Alternative gene names: ENSG00000261693.1; RP13-467H17.1; OTTHUMG00000164869.1; AC134682.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.1874 non-coding 
CPAT coding probability 94.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADGRB1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BAI1-1:1
4.0 lnc-BAI1-1:1
4.1 lnc-BAI1-1:1
5.0 lnc-BAI1-1:1
5.1 lnc-GPT-76:5
5.2 lnc-ADGRB1-1:5