Transcript: lnc-ADGRE5-3:1

Basic information

LNCipedia transcript ID: lnc-ADGRE5-3:1 
LNCipedia gene ID: lnc-ADGRE5-3
Ensembl Gene ID: ENSG00000267474
Ensembl Transcript ID: ENST00000589702
Location (hg19): chr19:14569213-14570178
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 889 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061417; ENST00000589702.1
Alternative gene names: ENSG00000267474.1; CTC-548K16.6; AC008569.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.2195 non-coding 
CPAT coding probability 3.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADGRE5-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012318.1-3:1
4.0 lnc-AC012318.1-3:1
4.1 lnc-AC012318.1-3:1
5.0 lnc-AC012318.1-3:1
5.1 lnc-ZNF763-54:1
5.2 lnc-ADGRE5-3:1