Transcript: lnc-ADGRL3-5:1

Basic information

LNCipedia transcript ID: lnc-ADGRL3-5:1 
LNCipedia gene ID: lnc-ADGRL3-5
Ensembl Gene ID: ENSG00000251055
Ensembl Transcript ID: ENST00000507857
Location (hg19): chr4:63994029-64009599
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 672 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507857; ENST00000507857.2; RP11-257A22.1-001; OTTHUMT00000368589.2; NONHSAT096634
Alternative gene names: ENSG00000251055; RP11-257A22.1; ENSG00000251055.2; OTTHUMG00000162339.2; AC097491.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.3113 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADGRL3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPHN3-4:1
3.1 lnc-LPHN3-5:1
4.0 lnc-LPHN3-5:1
4.1 lnc-LPHN3-5:1
5.0 lnc-LPHN3-5:1
5.1 lnc-CEP135-78:1
5.2 lnc-ADGRL3-5:1