Transcript: lnc-ADGRL4-5:2

Basic information

LNCipedia transcript ID: lnc-ADGRL4-5:2 
LNCipedia gene ID: lnc-ADGRL4-5
Ensembl Gene ID: ENSG00000282898
Ensembl Transcript ID: ENST00000635706
Location (hg19): chr1:79789454-79790537
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 559 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635706.1
Alternative gene names: ENSG00000282898.1; RP4-726F1.2; AL353651.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.187 non-coding 
CPAT coding probability 5.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADGRL4-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ELTD1-5:3
4.1 lnc-ELTD1-5:3
5.0 lnc-ELTD1-5:3
5.1 lnc-FUBP1-21:2
5.2 lnc-ADGRL4-5:2