Transcript: lnc-ADSS-2:1

Basic information

LNCipedia transcript ID: lnc-ADSS-2:1 
LNCipedia gene ID: lnc-ADSS-2
Location (hg19): chr1:244393073-244401962
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2541 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001899; NONHSAT010634
Alternative gene names: XLOC_001288; linc-AKT3-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.0955 non-coding 
CPAT coding probability 81.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ADSS-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADSS-1:1
3.1 lnc-ADSS-2:1
4.0 lnc-ADSS-2:1
4.1 lnc-ADSS-2:1
5.0 lnc-ADSS-2:1
5.1 lnc-CHML-32:1
5.2 lnc-ADSS-2:1