Transcript: lnc-ADTRP-2:1

Basic information

LNCipedia transcript ID: lnc-ADTRP-2:1 
LNCipedia gene ID: lnc-ADTRP-2
RefSeq ID: NR_125853
Location (hg19): chr6:11990576-12001477
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 385 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125853; NR_125853.1
Alternative gene names: LOC101928253


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -271.9351 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADTRP-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf105-2:3
4.0 lnc-C6orf105-2:3
4.1 lnc-C6orf105-2:3
5.0 lnc-C6orf105-2:3
5.1 lnc-ECI2-251:1
5.2 lnc-ADTRP-2:1