Transcript: lnc-AFAP1L2-5:1

Basic information

LNCipedia transcript ID: lnc-AFAP1L2-5:1 
LNCipedia gene ID: lnc-AFAP1L2-5
Location (hg19): chr10:116354761-116370476
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 356 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT016459
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AFAP1L2-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AFAP1L2-5:1
4.0 lnc-AFAP1L2-5:1
4.1 lnc-AFAP1L2-5:1
5.0 lnc-AFAP1L2-5:1
5.1 lnc-BBIP1-46:1
5.2 lnc-AFAP1L2-5:1