Transcript: lnc-AFM-3:1

Basic information

LNCipedia transcript ID: lnc-AFM-3:1 
LNCipedia gene ID: lnc-AFM-3
Location (hg19): chr4:74426245-74438192
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 750 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2664_chr4:74426244-74438192_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.2593 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AFM-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AFM-3:1
4.0 lnc-AFM-3:1
4.1 lnc-AFM-3:1
5.0 lnc-AFM-3:1
5.1 lnc-ART3-38:1
5.2 lnc-AFM-3:1