Transcript: lnc-AGA-24:11

Basic information

LNCipedia transcript ID: lnc-AGA-24:11 
LNCipedia gene ID: lnc-AGA-24
Location (hg19): chr4:178145131-178148319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 922 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000074664.1|FTMT21300035094.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.6908 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGA-24:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-487E13.1.1-1:13
5.0 lnc-RP11-487E13.1.1-1:13
5.1 lnc-AGA-7:11
5.2 lnc-AGA-24:11