Transcript: lnc-AGAP5-1:14

Basic information

LNCipedia transcript ID: lnc-AGAP5-1:14 
LNCipedia gene ID: lnc-AGAP5-1
Location (hg19): chr10:75502710-75504069
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 355 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242288.6|FTMT23700000218.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -188.0149 non-coding 
CPAT coding probability 4.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGAP5-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGAP5-1:14
5.0 lnc-AGAP5-1:14
5.1 lnc-VSIR-31:2
5.2 lnc-AGAP5-1:14