Transcript: lnc-AGRP-1:13

Basic information

LNCipedia transcript ID: lnc-AGRP-1:13 
LNCipedia gene ID: lnc-AGRP-1
Location (hg19): chr16:67573341-67596223
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 22074 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261386.2|HBMT00000562834.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 377.5422 coding 
CPAT coding probability 46.62% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AGRP-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGRP-1:13
5.0 lnc-AGRP-1:13
5.1 lnc-PSMB10-10:8
5.2 lnc-AGRP-1:13