Transcript: lnc-AGT-6:4

Basic information

LNCipedia transcript ID: lnc-AGT-6:4 
LNCipedia gene ID: lnc-AGT-6
Location (hg19): chr1:230936883-230938863
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 626 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT010140
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1546 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGT-6:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf198-3:7
4.0 lnc-AGT-6:4
4.1 lnc-AGT-6:4
5.0 lnc-AGT-6:4
5.1 lnc-EXOC8-13:7
5.2 lnc-AGT-6:4