Transcript: lnc-AIM2-3:2

Basic information

LNCipedia transcript ID: lnc-AIM2-3:2 
LNCipedia gene ID: lnc-AIM2-3
Location (hg19): chr1:158964324-158985400
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7725 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079027.1|ENCT00000033244.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.5111 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AIM2-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AIM2-3:2
5.0 lnc-AIM2-3:2
5.1 lnc-TAGLN2-12:2
5.2 lnc-AIM2-3:2