Transcript: lnc-AKAP13-5:2

Basic information

LNCipedia transcript ID: lnc-AKAP13-5:2 
LNCipedia gene ID: lnc-AKAP13-5
Location (hg19): chr15:85895269-85909246
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 429 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT048077
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.6065 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKAP13-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDE8A-5:1
4.0 lnc-PDE8A-5:1
4.1 lnc-PDE8A-5:1
5.0 lnc-PDE8A-5:1
5.1 lnc-AGBL1-15:1
5.2 lnc-AKAP13-5:2