Transcript: lnc-AKAP9-1:5

Basic information

LNCipedia transcript ID: lnc-AKAP9-1:5 
LNCipedia gene ID: lnc-AKAP9-1
Location (hg19): chr7:91510118-91519214
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3855 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000093058.1|ENCT00000402321.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.8734 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKAP9-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKAP9-1:5
5.0 lnc-AKAP9-1:5
5.1 lnc-LAMTOR4-111:2
5.2 lnc-AKAP9-1:5