Transcript: lnc-AKR1C2-3:19

Basic information

LNCipedia transcript ID: lnc-AKR1C2-3:19 
LNCipedia gene ID: lnc-AKR1C2-3
Location (hg19): chr10:4803265-4806235
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1074 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231298.2|HBMT00000158851.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.8427 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1C2-3:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1C2-3:19
5.0 lnc-AKR1C2-3:19
5.1 lnc-KLF6-37:16
5.2 lnc-AKR1C2-3:19