Transcript: lnc-AKTIP-10:4

Basic information

LNCipedia transcript ID: lnc-AKTIP-10:4 
LNCipedia gene ID: lnc-AKTIP-10
Location (hg19): chr16:53075719-53076913
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1096 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024658; NONHSAT142559
Alternative gene names: XLOC_011944; linc-TOX3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.5334 non-coding 
CPAT coding probability 7.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKTIP-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKTIP-1:2
3.1 lnc-AKTIP-1:2
4.0 lnc-AKTIP-1:2
4.1 lnc-AKTIP-1:2
5.0 lnc-AKTIP-1:2
5.1 lnc-CFAP20-108:4
5.2 lnc-AKTIP-10:4