Transcript: lnc-ALG14-1:3

Basic information

LNCipedia transcript ID: lnc-ALG14-1:3 
LNCipedia gene ID: lnc-ALG14-1
RefSeq ID: NR_125948
Location (hg19): chr1:95628775-95699538
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2473 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125948; NR_125948.1
Alternative gene names: LOC101928118


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.3289 non-coding 
CPAT coding probability 13.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG14-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG14-1:3
4.0 lnc-ALG14-1:3
4.1 lnc-ALG14-1:3
5.0 lnc-ALG14-1:3
5.1 lnc-CNN3-10:6
5.2 lnc-ALG14-1:3