Transcript: lnc-ALG1L-2:15

Basic information

LNCipedia transcript ID: lnc-ALG1L-2:15 
LNCipedia gene ID: lnc-ALG1L-2
RefSeq ID: NR_125396
Location (hg19): chr3:125546080-125604920
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 522 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125396; NR_125396.1
Alternative gene names: LOC101927056


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.9894 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG1L-2:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG1L-2:15
4.0 lnc-ALG1L-2:15
4.1 lnc-ALG1L-2:15
5.0 lnc-ALG1L-2:15
5.1 lnc-SLC41A3-5:28
5.2 lnc-ALG1L-2:15