Transcript: lnc-ALG1L-2:31

Basic information

LNCipedia transcript ID: lnc-ALG1L-2:31 
LNCipedia gene ID: lnc-ALG1L-2
Location (hg19): chr3:125566940-125709380
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 467 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248787.1|FTMT20900038753.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.3768 non-coding 
CPAT coding probability 28.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALG1L-2:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALG1L-2:31
5.0 lnc-ALG1L-2:31
5.1 lnc-SLC41A3-5:1
5.2 lnc-ALG1L-2:31