Transcript: lnc-ALKAL2-2:23

Basic information

LNCipedia transcript ID: lnc-ALKAL2-2:23 
LNCipedia gene ID: lnc-ALKAL2-2
Location (hg19): chr2:305841-309411
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 912 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235779.3|ENST00000590678.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.7995 non-coding 
CPAT coding probability 12.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALKAL2-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM150B-2:35
5.0 lnc-FAM150B-2:35
5.1 lnc-RAD51AP2-229:23
5.2 lnc-ALKAL2-2:23