Transcript: lnc-ALOX12B-4:1

Basic information

LNCipedia transcript ID: lnc-ALOX12B-4:1 
LNCipedia gene ID: lnc-ALOX12B-4
Location (hg19): chr17:7927237-7927895
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 659 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032973.1|ENCT00000180651.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.6253 non-coding 
CPAT coding probability 6.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALOX12B-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALOX12B-4:1
5.0 lnc-ALOX12B-4:1
5.1 lnc-YBX2-31:1
5.2 lnc-ALOX12B-4:1