Transcript: lnc-ALPK2-2:7

Basic information

LNCipedia transcript ID: lnc-ALPK2-2:7 
LNCipedia gene ID: lnc-ALPK2-2
Location (hg19): chr18:56336822-56338503
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1250 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267226.1|ENCT00000198005.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -178.2353 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALPK2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALPK2-2:7
5.0 lnc-ALPK2-2:7
5.1 lnc-MBD2-42:7
5.2 lnc-ALPK2-2:7