Transcript: lnc-ALX3-4:1

Basic information

LNCipedia transcript ID: lnc-ALX3-4:1 
LNCipedia gene ID: lnc-ALX3-4
Location (hg19): chr1:110552979-110554132
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 748 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT005077
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 155.4404 coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALX3-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALX3-4:1
4.0 lnc-ALX3-4:1
4.1 lnc-ALX3-4:1
5.0 lnc-ALX3-4:1
5.1 lnc-LAMTOR5-9:1
5.2 lnc-ALX3-4:1