Transcript: lnc-AMELY-20:1

Basic information

LNCipedia transcript ID: lnc-AMELY-20:1 
LNCipedia gene ID: lnc-AMELY-20
Location (hg19): chrY:8132490-8145229
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 992 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT139379
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.688 non-coding 
CPAT coding probability 52.44% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMELY-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006156.2-17:1
4.0 lnc-AC006156.2-17:1
4.1 lnc-AC006156.2-17:1
5.0 lnc-AC006156.2-17:1
5.1 lnc-DAZ1-132:1
5.2 lnc-AMELY-20:1