Transcript: lnc-AMELY-5:2

Basic information

LNCipedia transcript ID: lnc-AMELY-5:2 
LNCipedia gene ID: lnc-AMELY-5
Location (hg19): chrY:6126374-6131976
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 467 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000452103.1; FAM197Y9-001; OTTHUMT00000098300.2
Alternative gene names: ENSG00000234830.2; FAM197Y9; OTTHUMG00000040945.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.3292 non-coding 
CPAT coding probability 19.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMELY-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMELY-5:2
4.0 lnc-AMELY-5:2
4.1 lnc-AMELY-5:2
5.0 lnc-AMELY-5:2
5.1 lnc-DAZ1-144:2
5.2 lnc-AMELY-5:2