Transcript: lnc-AMZ1-8:1

Basic information

LNCipedia transcript ID: lnc-AMZ1-8:1 
LNCipedia gene ID: lnc-AMZ1-8
Location (hg19): chr7:2884355-2885807
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1453 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000091077.1|ENCT00000395845.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.2201 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AMZ1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AMZ1-8:1
5.0 lnc-AMZ1-8:1
5.1 lnc-GPER1-62:1
5.2 lnc-AMZ1-8:1