Transcript: lnc-ANGPT2-2:2

Basic information

LNCipedia transcript ID: lnc-ANGPT2-2:2 
LNCipedia gene ID: lnc-ANGPT2-2
Ensembl Gene ID: ENSG00000246089
Ensembl Transcript ID: ENST00000500118
Location (hg19): chr8:6261072-6264069
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2413 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500118; ENST00000500118.2; RP11-115C21.2-001; OTTHUMT00000374529.1; NONHSAT124770
Alternative gene names: ENSG00000246089; RP11-115C21.2; ENSG00000246089.2; OTTHUMG00000163617.2; ENSG00000246089.3; AC016065.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.4647 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPT2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGPT2-1:3
3.1 lnc-ANGPT2-2:2
4.0 lnc-ANGPT2-2:2
4.1 lnc-ANGPT2-2:2
5.0 lnc-ANGPT2-2:2
5.1 lnc-DEFA1B-19:15
5.2 lnc-ANGPT2-2:2