Transcript: lnc-ANGPT2-2:4

Basic information

LNCipedia transcript ID: lnc-ANGPT2-2:4 
LNCipedia gene ID: lnc-ANGPT2-2
Location (hg19): chr8:6262449-6264055
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1451 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00014919
Alternative gene names: XLOC_006985; linc-CSMD1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.8452 non-coding 
CPAT coding probability 5.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPT2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGPT2-1:4
3.1 lnc-ANGPT2-2:4
4.0 lnc-ANGPT2-2:4
4.1 lnc-ANGPT2-2:4
5.0 lnc-ANGPT2-2:4
5.1 lnc-DEFA1B-19:23
5.2 lnc-ANGPT2-2:4