Transcript: lnc-ANGPT2-2:6

Basic information

LNCipedia transcript ID: lnc-ANGPT2-2:6 
LNCipedia gene ID: lnc-ANGPT2-2
RefSeq ID: NR_040040
Location (hg19): chr8:6261077-6264069
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2408 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_040040; NR_040040.1
Alternative gene names: LOC100287015


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.4647 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPT2-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPT2-2:6
4.0 lnc-ANGPT2-2:6
4.1 lnc-ANGPT2-2:6
5.0 lnc-ANGPT2-2:6
5.1 lnc-DEFA1B-19:16
5.2 lnc-ANGPT2-2:6