Transcript: lnc-ANGPTL2-2:1

Basic information

LNCipedia transcript ID: lnc-ANGPTL2-2:1 
LNCipedia gene ID: lnc-ANGPTL2-2
Ensembl Gene ID: ENSG00000224842
Ensembl Transcript ID: ENST00000451449
Location (hg19): chr9:129351873-129375979
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 449 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451449.2; RP11-123K19.1-002; OTTHUMT00000054119.2; NONHSAT134775
Alternative gene names: ENSG00000224842.2; RP11-123K19.1; OTTHUMG00000020690.2; AL161908.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.6304 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANGPTL2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGPTL2-2:1
4.0 lnc-ANGPTL2-2:1
4.1 lnc-ANGPTL2-2:1
5.0 lnc-ANGPTL2-2:1
5.1 lnc-SPOUT1-85:7
5.2 lnc-ANGPTL2-2:1