Transcript: lnc-ANKDD1B-5:4

Basic information

LNCipedia transcript ID: lnc-ANKDD1B-5:4 
LNCipedia gene ID: lnc-ANKDD1B-5
Location (hg19): chr5:75013488-75027022
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 854 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076307.1|ENCT00000345993.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.5312 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKDD1B-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKDD1B-5:4
5.0 lnc-ANKDD1B-5:4
5.1 lnc-BHMT2-45:3
5.2 lnc-ANKDD1B-5:4