Transcript: lnc-ANKRD18B-6:8

Basic information

LNCipedia transcript ID: lnc-ANKRD18B-6:8 
LNCipedia gene ID: lnc-ANKRD18B-6
Location (hg19): chr9:33603338-33605289
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 599 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000602933.1
Alternative gene names: ENSG00000226562.2; CYP4F26P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.8932 non-coding 
CPAT coding probability 8.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD18B-6:8 no no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL139008.2-1:9
4.0 lnc-ANKRD18B-6:8
4.1 lnc-ANKRD18B-6:8
5.0 lnc-ANKRD18B-6:8
5.1 lnc-RECK-59:8
5.2 lnc-ANKRD18B-6:8