Transcript: lnc-ANKRD20A2-16:1

Basic information

LNCipedia transcript ID: lnc-ANKRD20A2-16:1 
LNCipedia gene ID: lnc-ANKRD20A2-16
Ensembl Gene ID: ENSG00000240240
Ensembl Transcript ID: ENST00000588568
Location (hg19): chr9:42419017-42429602
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 536 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000588568.1
Alternative gene names: ENSG00000240240.8; RP11-146D12.2; DKFZp686P0734; BX664727.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.1814 non-coding 
CPAT coding probability 84.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A2-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FAM95B1:4
4.1 FAM95B1:4
5.0 FAM95B1:4
5.1 lnc-DCAF10-69:1
5.2 lnc-ANKRD20A2-16:1