Transcript: lnc-ANKRD20A4-18:1

Basic information

LNCipedia transcript ID: lnc-ANKRD20A4-18:1 
LNCipedia gene ID: lnc-ANKRD20A4-18
RefSeq ID: NR_126047
Location (hg19): chr9:66553200-66555601
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2259 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126047; NR_126047.1
Alternative gene names: LOC728673


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 106.0706 coding 
CPAT coding probability 22.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ANKRD20A4-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-262H14.4.1-6:6
4.0 lnc-RP11-262H14.4.1-6:6
4.1 lnc-RP11-262H14.4.1-6:6
5.0 lnc-RP11-262H14.4.1-6:6
5.1 lnc-ZNF658-55:1
5.2 lnc-ANKRD20A4-18:1