Transcript: lnc-ANKRD27-2:3

Basic information

LNCipedia transcript ID: lnc-ANKRD27-2:3 
LNCipedia gene ID: lnc-ANKRD27-2
Location (hg19): chr19:32881148-32896035
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 302 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027300; NONHSAT064195
Alternative gene names: XLOC_013300; linc-TSHZ3-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.3644 non-coding 
CPAT coding probability 7.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD27-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-2:3
3.1 lnc-ANKRD27-2:3
4.0 lnc-ANKRD27-2:3
4.1 lnc-ANKRD27-2:3
5.0 lnc-ANKRD27-2:3
5.1 lnc-SCGB2B2-96:14
5.2 lnc-ANKRD27-2:3