Transcript: lnc-ANKRD27-2:5

Basic information

LNCipedia transcript ID: lnc-ANKRD27-2:5 
LNCipedia gene ID: lnc-ANKRD27-2
Location (hg19): chr19:32880982-32882096
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00027728
Alternative gene names: XLOC_013300; linc-TSHZ3-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.3644 non-coding 
CPAT coding probability 4.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD27-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-2:5
3.1 lnc-ANKRD27-2:5
4.0 lnc-ANKRD27-2:5
4.1 lnc-ANKRD27-2:5
5.0 lnc-ANKRD27-2:5
5.1 lnc-SCGB2B2-96:17
5.2 lnc-ANKRD27-2:5