Transcript: lnc-ANKRD33-2:11

Basic information

LNCipedia transcript ID: lnc-ANKRD33-2:11 
LNCipedia gene ID: lnc-ANKRD33-2
Location (hg19): chr12:52240854-52241318
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 465 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259887.1|FTMT24800002635.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1075.7854 non-coding 
CPAT coding probability 29.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD33-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SCN8A-2:13
5.0 lnc-SCN8A-2:13
5.1 lnc-ANKRD33-2:2
5.2 lnc-ANKRD33-2:11