Transcript: lnc-ANKRD33B-10:3

Basic information

LNCipedia transcript ID: lnc-ANKRD33B-10:3 
LNCipedia gene ID: lnc-ANKRD33B-10
Ensembl Gene ID: ENSG00000272324
Ensembl Transcript ID: ENST00000606588
Location (hg19): chr5:10767736-10770392
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 242 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606588.1
Alternative gene names: ENSG00000272324.1; CTD-2154B17.4; ENSG00000272324.5; AC012629.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.5031 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD33B-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD33B-10:3
4.0 lnc-ANKRD33B-10:3
4.1 lnc-ANKRD33B-10:3
5.0 lnc-ANKRD33B-10:3
5.1 lnc-CARD6-241:4
5.2 lnc-ANKRD33B-10:3