Transcript: lnc-ANKRD50-5:1

Basic information

LNCipedia transcript ID: lnc-ANKRD50-5:1 
LNCipedia gene ID: lnc-ANKRD50-5
Location (hg19): chr4:127149786-127164167
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008570; NONHSAT098225
Alternative gene names: XLOC_004065; linc-ANKRD50-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.2457 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD50-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD50-5:1
3.1 lnc-ANKRD50-5:1
4.0 lnc-ANKRD50-5:1
4.1 lnc-ANKRD50-5:1
5.0 lnc-ANKRD50-5:1
5.1 lnc-TRPC3-21:1
5.2 lnc-ANKRD50-5:1