Transcript: lnc-ANKS6-3:1

Basic information

LNCipedia transcript ID: lnc-ANKS6-3:1 
LNCipedia gene ID: lnc-ANKS6-3
Ensembl Gene ID: ENSG00000270412
Ensembl Transcript ID: ENST00000605631
Location (hg19): chr9:101705619-101706057
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 439 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT133631; ENST00000605631.1
Alternative gene names: ENSG00000270412.1; RP11-92C4.6; AL136084.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.6257 non-coding 
CPAT coding probability 5.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKS6-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKS6-3:1
4.0 lnc-ANKS6-3:1
4.1 lnc-ANKS6-3:1
5.0 lnc-ANKS6-3:1
5.1 lnc-ERP44-15:1
5.2 lnc-ANKS6-3:1