Transcript: lnc-ANO2-10:3

Basic information

LNCipedia transcript ID: lnc-ANO2-10:3 
LNCipedia gene ID: lnc-ANO2-10
Location (hg19): chr12:5281732-5311160
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 16302 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000011079.1|MICT00000072226.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.2538 non-coding 
CPAT coding probability 4.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANO2-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANO2-10:3
5.0 lnc-ANO2-10:3
5.1 lnc-CHD4-61:1
5.2 lnc-ANO2-10:3