Transcript: lnc-ANXA2R-1:9

Basic information

LNCipedia transcript ID: lnc-ANXA2R-1:9 
LNCipedia gene ID: lnc-ANXA2R-1
Location (hg19): chr5:43013720-43067469
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1669 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000177738.3|FTMT21700035059.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.4512 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA2R-1:9 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep
  2. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf39-1:21
5.0 lnc-C5orf39-1:21
5.1 lnc-SELENOP-8:9
5.2 lnc-ANXA2R-1:9